Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TO15178 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TO15178 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TO15178 AC022532.1-201ENST00000624563 1728 ntBASIC14.38□□□□□ -0.11
TO15178 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TO15178 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.38□□□□□ -0.11
TO15178 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TO15178 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TO15178 AC068587.6-202ENST00000641839 5619 ntBASIC14.38□□□□□ -0.11
TO15178 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.37□□□□□ -0.11
TO15178 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TO15178 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 PAUPAR-201ENST00000630360 2965 ntBASIC14.37□□□□□ -0.11
TO15178 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TO15178 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
TO15178 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.37□□□□□ -0.11
TO15178 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.37□□□□□ -0.11
TO15178 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.37□□□□□ -0.11
TO15178 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TO15178 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
TO15178 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TO15178 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.37□□□□□ -0.11
TO15178 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.37□□□□□ -0.11
TO15178 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TO15178 FAM86LP-201ENST00000478302 853 ntBASIC14.37□□□□□ -0.11
TO15178 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.37□□□□□ -0.11
TO15178 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.37□□□□□ -0.11
TO15178 API5-211ENST00000534695 560 ntTSL 5 BASIC14.37□□□□□ -0.11
TO15178 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 AC093726.1-201ENST00000608064 963 ntBASIC14.37□□□□□ -0.11
TO15178 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TO15178 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.37□□□□□ -0.11
TO15178 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.37□□□□□ -0.11
TO15178 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.37□□□□□ -0.11
TO15178 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TO15178 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.37□□□□□ -0.11
TO15178 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.37□□□□□ -0.11
TO15178 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TO15178 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.36□□□□□ -0.11
TO15178 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TO15178 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TO15178 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
TO15178 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TO15178 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TO15178 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.36□□□□□ -0.11
TO15178 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TO15178 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.36□□□□□ -0.11
TO15178 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.36□□□□□ -0.11
TO15178 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.36□□□□□ -0.11
TO15178 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.36□□□□□ -0.11
TO15178 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.36□□□□□ -0.11
TO15178 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.36□□□□□ -0.11
TO15178 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.36□□□□□ -0.11
TO15178 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.36□□□□□ -0.11
TO15178 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.36□□□□□ -0.11
TO15178 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.36□□□□□ -0.11
TO15178 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TO15178 MIR3197-201ENST00000582241 73 ntBASIC14.36□□□□□ -0.11
TO15178 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.36□□□□□ -0.11
TO15178 AC025181.2-201ENST00000606994 802 ntBASIC14.36□□□□□ -0.11
TO15178 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.36□□□□□ -0.11
TO15178 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms