Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ATP2A1O14983 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.77■□□□□ 0.43
ATP2A1O14983 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.77■□□□□ 0.43
ATP2A1O14983 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP2A1O14983 AL662844.4-201ENST00000606367 2838 ntBASIC17.76■□□□□ 0.43
ATP2A1O14983 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.76■□□□□ 0.43
ATP2A1O14983 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.76■□□□□ 0.43
ATP2A1O14983 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.76■□□□□ 0.43
ATP2A1O14983 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATP2A1O14983 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.76■□□□□ 0.43
ATP2A1O14983 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.76■□□□□ 0.43
ATP2A1O14983 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
ATP2A1O14983 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.76■□□□□ 0.43
ATP2A1O14983 RN7SL219P-201ENST00000582872 296 ntBASIC17.76■□□□□ 0.43
ATP2A1O14983 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.76■□□□□ 0.43
ATP2A1O14983 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.76■□□□□ 0.43
ATP2A1O14983 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.76■□□□□ 0.43
ATP2A1O14983 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ATP2A1O14983 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP2A1O14983 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.76■□□□□ 0.43
ATP2A1O14983 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.75■□□□□ 0.43
ATP2A1O14983 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.75■□□□□ 0.43
ATP2A1O14983 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP2A1O14983 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.75■□□□□ 0.43
ATP2A1O14983 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP2A1O14983 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP2A1O14983 AL645937.2-201ENST00000396808 931 ntBASIC17.75■□□□□ 0.43
ATP2A1O14983 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.75■□□□□ 0.43
ATP2A1O14983 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ATP2A1O14983 KLF2P2-201ENST00000416807 1039 ntBASIC17.75■□□□□ 0.43
ATP2A1O14983 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.75■□□□□ 0.43
ATP2A1O14983 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.75■□□□□ 0.43
ATP2A1O14983 FAM197Y7-201ENST00000432892 766 ntBASIC17.75■□□□□ 0.43
ATP2A1O14983 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.75■□□□□ 0.43
ATP2A1O14983 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ATP2A1O14983 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.75■□□□□ 0.43
ATP2A1O14983 AC078819.1-201ENST00000547454 765 ntBASIC17.75■□□□□ 0.43
ATP2A1O14983 AC012085.1-201ENST00000548270 765 ntBASIC17.75■□□□□ 0.43
ATP2A1O14983 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.75■□□□□ 0.43
ATP2A1O14983 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.75■□□□□ 0.43
ATP2A1O14983 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP2A1O14983 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ATP2A1O14983 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP2A1O14983 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP2A1O14983 AL603832.2-201ENST00000566195 2125 ntBASIC17.75■□□□□ 0.43
ATP2A1O14983 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ATP2A1O14983 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.75■□□□□ 0.43
ATP2A1O14983 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.75■□□□□ 0.43
ATP2A1O14983 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP2A1O14983 AC063926.3-201ENST00000624734 5658 ntBASIC17.74■□□□□ 0.43
ATP2A1O14983 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 CYP2T1P-202ENST00000641596 2535 ntBASIC17.74■□□□□ 0.43
ATP2A1O14983 AC068587.6-202ENST00000641839 5619 ntBASIC17.74■□□□□ 0.43
ATP2A1O14983 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP2A1O14983 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ATP2A1O14983 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP2A1O14983 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.74■□□□□ 0.43
ATP2A1O14983 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP2A1O14983 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ATP2A1O14983 BRWD1P1-201ENST00000401091 371 ntBASIC17.74■□□□□ 0.43
ATP2A1O14983 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.74■□□□□ 0.43
ATP2A1O14983 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP2A1O14983 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP2A1O14983 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP2A1O14983 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms