Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 AC011742.3-201ENST00000439053 820 ntBASIC20.38■□□□□ 0.85
PIK3C2AO00443 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 AC021723.1-201ENST00000486306 515 ntBASIC20.38■□□□□ 0.85
PIK3C2AO00443 RCC2P8-201ENST00000502779 1035 ntBASIC20.38■□□□□ 0.85
PIK3C2AO00443 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.38■□□□□ 0.85
PIK3C2AO00443 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 AL137783.1-201ENST00000623494 1896 ntBASIC20.38■□□□□ 0.85
PIK3C2AO00443 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 LINC02199-201ENST00000506655 2702 ntBASIC20.38■□□□□ 0.85
PIK3C2AO00443 AL139384.1-201ENST00000612143 3047 ntBASIC20.38■□□□□ 0.85
PIK3C2AO00443 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 AC020910.5-201ENST00000623668 1865 ntBASIC20.38■□□□□ 0.85
PIK3C2AO00443 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 AC244394.1-201ENST00000435000 1665 ntBASIC20.38■□□□□ 0.85
PIK3C2AO00443 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 CDC23-208ENST00000505120 455 ntTSL 3 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 SNX1-214ENST00000625244 324 ntTSL 5 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.38■□□□□ 0.85
PIK3C2AO00443 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PIK3C2AO00443 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.37■□□□□ 0.85
PIK3C2AO00443 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.37■□□□□ 0.85
PIK3C2AO00443 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.37■□□□□ 0.85
PIK3C2AO00443 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 PCDHB19P-201ENST00000570871 2371 ntBASIC20.37■□□□□ 0.85
PIK3C2AO00443 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.37■□□□□ 0.85
PIK3C2AO00443 ISCA2P1-201ENST00000425548 448 ntBASIC20.37■□□□□ 0.85
PIK3C2AO00443 KLF2P1-201ENST00000447438 1042 ntBASIC20.37■□□□□ 0.85
PIK3C2AO00443 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.37■□□□□ 0.85
PIK3C2AO00443 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
PIK3C2AO00443 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC20.37■□□□□ 0.85
PIK3C2AO00443 MEG3_2.1-201ENST00000611456 105 ntBASIC20.37■□□□□ 0.85
PIK3C2AO00443 YRDCP1-201ENST00000621419 643 ntBASIC20.37■□□□□ 0.85
PIK3C2AO00443 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.37■□□□□ 0.85
PIK3C2AO00443 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PIK3C2AO00443 AC020916.1-201ENST00000587762 1774 ntBASIC20.37■□□□□ 0.85
PIK3C2AO00443 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PIK3C2AO00443 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 AC234782.1-201ENST00000451950 919 ntBASIC20.36■□□□□ 0.85
PIK3C2AO00443 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PIK3C2AO00443 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PIK3C2AO00443 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms