Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 TSSK5P-201ENST00000423978 907 ntBASIC15.65■□□□□ 0.1
CFAP99D6REC4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.65■□□□□ 0.1
CFAP99D6REC4 TARDBPP1-201ENST00000442013 1203 ntBASIC15.65■□□□□ 0.1
CFAP99D6REC4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 INGX-202ENST00000489074 768 ntBASIC15.65■□□□□ 0.1
CFAP99D6REC4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 AL390955.2-201ENST00000603032 514 ntBASIC15.65■□□□□ 0.1
CFAP99D6REC4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 AC022144.1-201ENST00000602255 1580 ntBASIC15.65■□□□□ 0.1
CFAP99D6REC4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CFAP99D6REC4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CFAP99D6REC4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
CFAP99D6REC4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CFAP99D6REC4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 AL607033.1-201ENST00000623900 1599 ntBASIC15.64■□□□□ 0.09
CFAP99D6REC4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 AL109936.8-201ENST00000641772 604 ntBASIC15.64■□□□□ 0.09
CFAP99D6REC4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.64■□□□□ 0.09
CFAP99D6REC4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.64■□□□□ 0.09
CFAP99D6REC4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CFAP99D6REC4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.64■□□□□ 0.09
CFAP99D6REC4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.63■□□□□ 0.09
CFAP99D6REC4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CFAP99D6REC4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms