Protein–RNA interactions for Protein: A6NLU5

VSTM2B, V-set and transmembrane domain-containing protein 2B, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2BA6NLU5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 AC107373.2-201ENST00000607735 490 ntBASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSTM2BA6NLU5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 ACKR1-201ENST00000368121 1240 ntBASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 AC005229.1-201ENST00000392885 409 ntBASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 BOLA2P3-201ENST00000404566 256 ntBASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 AP001889.1-201ENST00000525414 633 ntBASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 MIR6805-201ENST00000615055 62 ntBASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 MIR6752-201ENST00000618442 71 ntBASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 AC018665.1-201ENST00000622927 1362 ntBASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSTM2BA6NLU5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.58□□□□□ -0.07
VSTM2BA6NLU5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
VSTM2BA6NLU5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VSTM2BA6NLU5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VSTM2BA6NLU5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
VSTM2BA6NLU5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 MIR1909-201ENST00000411312 80 ntBASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 BAATP1-201ENST00000412284 1225 ntBASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 KRT43P-201ENST00000434019 910 ntBASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 AC093433.1-201ENST00000458048 571 ntBASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 AC068587.3-201ENST00000526613 355 ntBASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.58□□□□□ -0.08
VSTM2BA6NLU5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms