Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 MME-218ENST00000625667 363 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TMEM88BA6NKF7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 AL357563.1-201ENST00000404728 395 ntBASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 RN7SKP175-201ENST00000408472 289 ntBASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 AC084752.1-201ENST00000509766 622 ntBASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 AC093752.3-201ENST00000567343 901 ntBASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 MIR4472-1-201ENST00000584349 80 ntBASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM88BA6NKF7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 NOC2LP2-201ENST00000407594 1944 ntBASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 KLF2P1-201ENST00000447438 1042 ntBASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 PHBP15-201ENST00000574228 665 ntBASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 SIGLEC18P-201ENST00000602271 909 ntBASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms