Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.77■□□□□ 0.92
SBNO1A3KN83 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SBNO1A3KN83 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SBNO1A3KN83 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SBNO1A3KN83 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SBNO1A3KN83 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 AC006449.5-201ENST00000610658 2098 ntBASIC20.76■□□□□ 0.91
SBNO1A3KN83 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 CMC1-204ENST00000423894 549 ntTSL 2 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 AC006335.1-201ENST00000445200 547 ntBASIC20.76■□□□□ 0.91
SBNO1A3KN83 CEP164P1-201ENST00000455142 418 ntBASIC20.76■□□□□ 0.91
SBNO1A3KN83 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 AC125604.1-201ENST00000496255 707 ntBASIC20.76■□□□□ 0.91
SBNO1A3KN83 LY6E-208ENST00000520531 490 ntTSL 2 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 MIR3147-201ENST00000577811 66 ntBASIC20.76■□□□□ 0.91
SBNO1A3KN83 RN7SL163P-201ENST00000583100 276 ntBASIC20.76■□□□□ 0.91
SBNO1A3KN83 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SBNO1A3KN83 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.76■□□□□ 0.91
SBNO1A3KN83 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
SBNO1A3KN83 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SBNO1A3KN83 AC004899.1-201ENST00000424687 1714 ntBASIC20.75■□□□□ 0.91
SBNO1A3KN83 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SBNO1A3KN83 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SBNO1A3KN83 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SBNO1A3KN83 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SBNO1A3KN83 PDIA3P2-201ENST00000428073 158 ntBASIC20.75■□□□□ 0.91
SBNO1A3KN83 AC116345.2-201ENST00000512837 523 ntBASIC20.75■□□□□ 0.91
SBNO1A3KN83 SAMD11P1-201ENST00000571429 661 ntBASIC20.75■□□□□ 0.91
SBNO1A3KN83 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SBNO1A3KN83 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SBNO1A3KN83 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SBNO1A3KN83 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.75■□□□□ 0.91
SBNO1A3KN83 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SBNO1A3KN83 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SBNO1A3KN83 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SBNO1A3KN83 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SBNO1A3KN83 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SBNO1A3KN83 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SBNO1A3KN83 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 DUX4L47-201ENST00000566374 394 ntBASIC20.74■□□□□ 0.91
SBNO1A3KN83 AC020922.3-201ENST00000595064 547 ntBASIC20.74■□□□□ 0.91
SBNO1A3KN83 AC009955.4-201ENST00000597192 544 ntBASIC20.74■□□□□ 0.91
SBNO1A3KN83 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 PCBP2-OT1-201ENST00000634357 590 ntBASIC20.74■□□□□ 0.91
SBNO1A3KN83 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.74■□□□□ 0.91
SBNO1A3KN83 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 AL603832.2-201ENST00000566195 2125 ntBASIC20.74■□□□□ 0.91
SBNO1A3KN83 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SBNO1A3KN83 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SBNO1A3KN83 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.73■□□□□ 0.91
SBNO1A3KN83 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms