Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 GHSR-202ENST00000427970 912 ntBASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AC009947.1-201ENST00000444350 727 ntBASIC13.6□□□□□ -0.23
SHISA3A0PJX4 FAM197Y8-203ENST00000450145 560 ntBASIC13.6□□□□□ -0.23
SHISA3A0PJX4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AC023141.13-201ENST00000604991 943 ntBASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SHISA3A0PJX4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 AC011474.4-201ENST00000623523 2076 ntBASIC13.59□□□□□ -0.23
SHISA3A0PJX4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 AC015802.1-201ENST00000588104 1449 ntBASIC13.59□□□□□ -0.23
SHISA3A0PJX4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 CRYGEP-201ENST00000412192 528 ntBASIC13.59□□□□□ -0.23
SHISA3A0PJX4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 IFNL4P1-201ENST00000607083 540 ntBASIC13.59□□□□□ -0.23
SHISA3A0PJX4 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.59□□□□□ -0.23
SHISA3A0PJX4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms