Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC187A0A096LP49 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 AL596257.1-201ENST00000641463 2694 ntBASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 NFIC-211ENST00000641145 8399 ntBASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 ECM1P1-201ENST00000604092 1279 ntBASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC187A0A096LP49 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC187A0A096LP49 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
CCDC187A0A096LP49 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.71□□□□□ -0.06
CCDC187A0A096LP49 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC187A0A096LP49 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC187A0A096LP49 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CCDC187A0A096LP49 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC187A0A096LP49 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.71□□□□□ -0.06
CCDC187A0A096LP49 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.71□□□□□ -0.06
CCDC187A0A096LP49 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 AL096828.3-201ENST00000615354 462 ntBASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms