Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AC012640.2-201ENST00000561606 901 ntBASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV18A0A075B6X5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 FAM8A3P-201ENST00000427218 844 ntBASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV18A0A075B6X5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 AC138969.2-201ENST00000532739 9932 ntBASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 AC004987.2-201ENST00000395959 1148 ntBASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 AC024267.1-201ENST00000582320 895 ntBASIC13.47□□□□□ -0.25
TRAV18A0A075B6X5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms