Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 REXO1L2P-201ENST00000425429 2069 ntBASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB1Q9Y5G3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 AC008735.5-201ENST00000623544 497 ntBASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGB1Q9Y5G3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 AC092135.3-201ENST00000624151 1846 ntBASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 AL359881.3-201ENST00000602640 1721 ntBASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 AC018712.1-201ENST00000455767 687 ntBASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 AC109635.5-201ENST00000533593 962 ntBASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 AC105339.3-201ENST00000560043 636 ntBASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 AL355385.1-201ENST00000606123 409 ntBASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 FAM215A-202ENST00000632077 792 ntBASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms