Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 AC022137.2-201ENST00000503482 481 ntBASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 AP001889.1-201ENST00000525414 633 ntBASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM35Q9UPQ4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 AP000845.1-201ENST00000581677 2131 ntBASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 HLA-K-203ENST00000430151 1046 ntBASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 KRT17P7-201ENST00000451704 1104 ntBASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 AC004066.1-201ENST00000502488 802 ntBASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 TDH-203ENST00000531764 1110 ntBASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 BX539320.1-201ENST00000623759 877 ntBASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 AC022726.2-201ENST00000634673 547 ntBASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 AC006486.2-201ENST00000624246 2199 ntBASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM35Q9UPQ4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 AC012441.1-201ENST00000446669 685 ntBASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 SLC25A47P1-201ENST00000531577 414 ntBASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM35Q9UPQ4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms