Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 GGT3P-204ENST00000453783 1664 ntBASIC13.83□□□□□ -0.2
DUX4Q9UBX2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 AC002056.1-201ENST00000395613 760 ntBASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 AL355306.1-201ENST00000415580 579 ntBASIC13.83□□□□□ -0.2
DUX4Q9UBX2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 ADH5P3-201ENST00000433842 1137 ntBASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 DNAJB3-201ENST00000446806 729 ntBASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 GPAA1P2-202ENST00000606848 1787 ntBASIC13.83□□□□□ -0.2
DUX4Q9UBX2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
DUX4Q9UBX2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 AC006486.2-201ENST00000624246 2199 ntBASIC13.82□□□□□ -0.2
DUX4Q9UBX2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 AC010491.1-201ENST00000563101 2797 ntBASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 PMS2P4-201ENST00000412466 1052 ntBASIC13.82□□□□□ -0.2
DUX4Q9UBX2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CEND1P1-201ENST00000451006 455 ntBASIC13.82□□□□□ -0.2
DUX4Q9UBX2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 AC005829.1-201ENST00000570002 483 ntBASIC13.82□□□□□ -0.2
DUX4Q9UBX2 MIR3909-201ENST00000579518 119 ntBASIC13.82□□□□□ -0.2
DUX4Q9UBX2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 AC021097.1-201ENST00000607902 574 ntBASIC13.82□□□□□ -0.2
DUX4Q9UBX2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
DUX4Q9UBX2 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms