Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 AP000344.2-201ENST00000512987 629 ntBASIC15.05■□□□□ -0
LRTM1Q9HBL6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 AC004835.2-201ENST00000603762 682 ntBASIC15.05■□□□□ -0
LRTM1Q9HBL6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 AC084364.1-201ENST00000551967 1556 ntBASIC15.05■□□□□ -0
LRTM1Q9HBL6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 KRT8P12-202ENST00000472924 1397 ntBASIC15.04■□□□□ -0
LRTM1Q9HBL6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 MIR3687-2-201ENST00000577708 61 ntBASIC15.04■□□□□ -0
LRTM1Q9HBL6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 MIR3687-1-201ENST00000614492 61 ntBASIC15.04■□□□□ -0
LRTM1Q9HBL6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 OR2I1P-209ENST00000641730 5365 ntBASIC15.04■□□□□ -0
LRTM1Q9HBL6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 LINC00528-201ENST00000600723 2160 ntBASIC15.04■□□□□ -0
LRTM1Q9HBL6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.04■□□□□ -0
LRTM1Q9HBL6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LRTM1Q9HBL6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 FAM45BP-202ENST00000592932 1624 ntBASIC15.03■□□□□ -0
LRTM1Q9HBL6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRTM1Q9HBL6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
LRTM1Q9HBL6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms