Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 MROH4P-201ENST00000431302 1578 ntBASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 AC211486.1-202ENST00000416371 468 ntBASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 AC211476.1-201ENST00000503899 468 ntBASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.81□□□□□ -0.04
BHLHE41Q9C0J9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 CETN4P-206ENST00000642099 2168 ntBASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 AP002414.2-201ENST00000591780 3365 ntBASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
BHLHE41Q9C0J9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms