Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 KRT8P37-201ENST00000451609 1420 ntBASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.17■□□□□ 0.18
FOXP3Q9BZS1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 AC239800.4-201ENST00000603712 296 ntBASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
FOXP3Q9BZS1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 WASH3P-207ENST00000560956 1394 ntBASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 FO538757.1-201ENST00000623083 1397 ntBASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 FOXO1B-201ENST00000504678 1527 ntBASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 FAM220BP-201ENST00000377689 816 ntBASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 TREML5P-201ENST00000421694 576 ntBASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 SPDYE14P-201ENST00000442619 822 ntBASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 IGHV3-42-201ENST00000520410 361 ntBASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 SLC25A39P2-201ENST00000537614 270 ntBASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 AL138918.1-201ENST00000568306 659 ntBASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 AL390754.1-201ENST00000619088 582 ntBASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXP3Q9BZS1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms