Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 AC022616.1-201ENST00000518688 554 ntBASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 MIR6727-201ENST00000620702 65 ntBASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 KRT8P4-201ENST00000509735 1454 ntBASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTFDC1Q9BY42 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 CYP2T1P-202ENST00000641596 2535 ntBASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 DPM3-202ENST00000368399 517 ntBASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 AL136309.1-201ENST00000403917 691 ntBASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 AL133466.1-201ENST00000447582 150 ntBASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 SPCS2P2-201ENST00000603270 608 ntBASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 AC024909.3-201ENST00000611513 2257 ntBASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTFDC1Q9BY42 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 RPS2P36-201ENST00000456516 831 ntBASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 RN7SL574P-201ENST00000581512 297 ntBASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 AL023803.2-201ENST00000620080 638 ntBASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.67■□□□□ 0.58
RTFDC1Q9BY42 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTFDC1Q9BY42 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTFDC1Q9BY42 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms