Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 REXO1L1P-202ENST00000608646 1974 ntBASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAF4Q9BUZ4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 TSSK5P-201ENST00000423978 907 ntBASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 AC098859.1-201ENST00000502915 1238 ntBASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 AL138828.2-201ENST00000615812 383 ntBASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 SNX33P1-201ENST00000592116 1762 ntBASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
TRAF4Q9BUZ4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 MRPS18AP1-201ENST00000414458 589 ntBASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF4Q9BUZ4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms