Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.21□□□□□ -0.45
TRGV9Q99603 AC040169.1-201ENST00000565382 521 ntBASIC12.21□□□□□ -0.45
TRGV9Q99603 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.21□□□□□ -0.45
TRGV9Q99603 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 AJ011931.1-201ENST00000618749 2492 ntBASIC12.21□□□□□ -0.45
TRGV9Q99603 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRGV9Q99603 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV9Q99603 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV9Q99603 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV9Q99603 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV9Q99603 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV9Q99603 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
TRGV9Q99603 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
TRGV9Q99603 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.21□□□□□ -0.46
TRGV9Q99603 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRGV9Q99603 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
TRGV9Q99603 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
TRGV9Q99603 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.2□□□□□ -0.46
TRGV9Q99603 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
TRGV9Q99603 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
TRGV9Q99603 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 AC069335.1-201ENST00000489972 472 ntBASIC12.2□□□□□ -0.46
TRGV9Q99603 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.2□□□□□ -0.46
TRGV9Q99603 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.2□□□□□ -0.46
TRGV9Q99603 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 AC011467.4-201ENST00000594891 528 ntBASIC12.2□□□□□ -0.46
TRGV9Q99603 AC120114.3-201ENST00000611923 658 ntBASIC12.2□□□□□ -0.46
TRGV9Q99603 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
TRGV9Q99603 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.2□□□□□ -0.46
TRGV9Q99603 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.2□□□□□ -0.46
TRGV9Q99603 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.2□□□□□ -0.46
TRGV9Q99603 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRGV9Q99603 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TRGV9Q99603 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV9Q99603 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV9Q99603 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV9Q99603 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.19□□□□□ -0.46
TRGV9Q99603 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
TRGV9Q99603 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV9Q99603 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TRGV9Q99603 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.19□□□□□ -0.46
TRGV9Q99603 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRGV9Q99603 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.19□□□□□ -0.46
TRGV9Q99603 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TRGV9Q99603 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms