Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.32□□□□□ -0.12
SNX18Q96RF0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNX18Q96RF0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 BEND3P1-201ENST00000421591 1944 ntBASIC14.31□□□□□ -0.12
SNX18Q96RF0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 ADH5P3-201ENST00000433842 1137 ntBASIC14.31□□□□□ -0.12
SNX18Q96RF0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 AC091812.2-201ENST00000619081 385 ntBASIC14.31□□□□□ -0.12
SNX18Q96RF0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNX18Q96RF0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNX18Q96RF0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 MIR346-201ENST00000362234 95 ntBASIC14.3□□□□□ -0.12
SNX18Q96RF0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 HMGN1P19-201ENST00000436976 333 ntBASIC14.3□□□□□ -0.12
SNX18Q96RF0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 KRT8P23-201ENST00000560090 1207 ntBASIC14.3□□□□□ -0.12
SNX18Q96RF0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.3□□□□□ -0.12
SNX18Q96RF0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SNX18Q96RF0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms