Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL139384.1-201ENST00000612143 3047 ntBASIC18.25■□□□□ 0.51
TRIM47Q96LD4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 AZGP1P1-201ENST00000411909 902 ntBASIC18.25■□□□□ 0.51
TRIM47Q96LD4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 SOCS2P1-201ENST00000417727 557 ntBASIC18.25■□□□□ 0.51
TRIM47Q96LD4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 AC016694.1-201ENST00000434179 700 ntBASIC18.25■□□□□ 0.51
TRIM47Q96LD4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 CLUHP6-201ENST00000580789 941 ntBASIC18.25■□□□□ 0.51
TRIM47Q96LD4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 AC079416.2-201ENST00000625035 1193 ntBASIC18.25■□□□□ 0.51
TRIM47Q96LD4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM47Q96LD4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 BAATP1-201ENST00000412284 1225 ntBASIC18.24■□□□□ 0.51
TRIM47Q96LD4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 AC106760.1-201ENST00000508690 800 ntBASIC18.24■□□□□ 0.51
TRIM47Q96LD4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 AL603832.2-201ENST00000566195 2125 ntBASIC18.24■□□□□ 0.51
TRIM47Q96LD4 DUX4L45-201ENST00000566406 1057 ntBASIC18.24■□□□□ 0.51
TRIM47Q96LD4 AL365330.1-201ENST00000607459 531 ntBASIC18.24■□□□□ 0.51
TRIM47Q96LD4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.24■□□□□ 0.51
TRIM47Q96LD4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM47Q96LD4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM47Q96LD4 AC005622.1-201ENST00000636801 1703 ntBASIC18.23■□□□□ 0.51
TRIM47Q96LD4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRIM47Q96LD4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM47Q96LD4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM47Q96LD4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM47Q96LD4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM47Q96LD4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRIM47Q96LD4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM47Q96LD4 AC010491.1-201ENST00000563101 2797 ntBASIC18.23■□□□□ 0.51
TRIM47Q96LD4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM47Q96LD4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM47Q96LD4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms