Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 AL160314.3-201ENST00000556041 767 ntBASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 MIR4683-201ENST00000579659 81 ntBASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 AC092171.5-201ENST00000608012 942 ntBASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 MIR648-201ENST00000385046 94 ntBASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM43Q96BQ3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 AC078991.1-201ENST00000437297 610 ntBASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 RN7SL8P-201ENST00000461771 266 ntBASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM43Q96BQ3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms