Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 AZGP1P1-201ENST00000411909 902 ntBASIC14.07□□□□□ -0.16
PTP4A1Q93096 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.07□□□□□ -0.16
PTP4A1Q93096 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTP4A1Q93096 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 AC005089.1-201ENST00000619486 2241 ntBASIC14.06□□□□□ -0.16
PTP4A1Q93096 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 SLC25A39P2-201ENST00000537614 270 ntBASIC14.06□□□□□ -0.16
PTP4A1Q93096 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
PTP4A1Q93096 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTP4A1Q93096 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 UXT-AS1-201ENST00000590504 1525 ntBASIC14.05□□□□□ -0.16
PTP4A1Q93096 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PTP4A1Q93096 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTP4A1Q93096 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms