Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
TRIM41Q8WV44 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM41Q8WV44 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM41Q8WV44 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM41Q8WV44 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC26.56■■□□□ 1.84
TRIM41Q8WV44 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TRIM41Q8WV44 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC26.56■■□□□ 1.84
TRIM41Q8WV44 DOC2GP-204ENST00000639052 2548 ntBASIC26.56■■□□□ 1.84
TRIM41Q8WV44 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 PCDHA1-201ENST00000378133 2726 ntBASIC26.55■■□□□ 1.84
TRIM41Q8WV44 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 HNRNPA1P32-201ENST00000396326 963 ntBASIC26.55■■□□□ 1.84
TRIM41Q8WV44 CYP46A4P-201ENST00000414953 267 ntBASIC26.55■■□□□ 1.84
TRIM41Q8WV44 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 AC244669.2-201ENST00000612320 853 ntBASIC26.55■■□□□ 1.84
TRIM41Q8WV44 AP000346.4-201ENST00000614827 381 ntBASIC26.55■■□□□ 1.84
TRIM41Q8WV44 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC26.55■■□□□ 1.84
TRIM41Q8WV44 AL121723.1-201ENST00000445194 1519 ntBASIC26.55■■□□□ 1.84
TRIM41Q8WV44 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 DEF8-202ENST00000418391 852 ntTSL 2 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 HNRNPA1P13-201ENST00000510646 963 ntBASIC26.54■■□□□ 1.84
TRIM41Q8WV44 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
TRIM41Q8WV44 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 CSH2-202ENST00000345366 598 ntTSL 5 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 AL133499.1-201ENST00000596207 608 ntBASIC26.53■■□□□ 1.84
TRIM41Q8WV44 AP001505.2-201ENST00000616815 443 ntBASIC26.53■■□□□ 1.84
TRIM41Q8WV44 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 RERG-209ENST00000546331 1383 ntTSL 2 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
TRIM41Q8WV44 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms