Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
RAB3IL1Q8TBN0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 AP002414.3-201ENST00000589352 1468 ntBASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 AC004987.2-201ENST00000395959 1148 ntBASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 RNPS1P1-201ENST00000507437 918 ntBASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 AC024267.1-201ENST00000582320 895 ntBASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB3IL1Q8TBN0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
RAB3IL1Q8TBN0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RAB3IL1Q8TBN0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AL121912.1-201ENST00000603683 238 ntBASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 TP73-AS1-207ENST00000624167 988 ntBASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AC005912.2-201ENST00000619492 2400 ntBASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB3IL1Q8TBN0 AL359258.3-201ENST00000622910 2331 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms