Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 AC023157.3-201ENST00000619086 2088 ntBASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDND2Q8NHS1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDND2Q8NHS1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDND2Q8NHS1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDND2Q8NHS1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDND2Q8NHS1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.33□□□□□ -0.27
CLDND2Q8NHS1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.33□□□□□ -0.27
CLDND2Q8NHS1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLDND2Q8NHS1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLDND2Q8NHS1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 AC004987.2-201ENST00000395959 1148 ntBASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 RN7SL752P-201ENST00000463779 287 ntBASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 TIMM17BP1-201ENST00000545713 516 ntBASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 AC243562.2-201ENST00000561247 970 ntBASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 AC138035.3-201ENST00000622706 2791 ntBASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDND2Q8NHS1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 REXO1L8P-201ENST00000604378 1897 ntBASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 OR8S1-201ENST00000310194 1080 ntBASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDND2Q8NHS1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms