Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 ATP5G2P4-201ENST00000442175 420 ntBASIC16.73■□□□□ 0.27
BEST2Q8NFU1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 GAPDHP40-201ENST00000505218 1006 ntBASIC16.73■□□□□ 0.27
BEST2Q8NFU1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 AL008721.1-201ENST00000609964 604 ntBASIC16.73■□□□□ 0.27
BEST2Q8NFU1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.73■□□□□ 0.27
BEST2Q8NFU1 AC105250.1-201ENST00000509378 2057 ntBASIC16.73■□□□□ 0.27
BEST2Q8NFU1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 RPL5P21-201ENST00000404620 815 ntBASIC16.72■□□□□ 0.27
BEST2Q8NFU1 ACTG1P3-201ENST00000431775 1114 ntBASIC16.72■□□□□ 0.27
BEST2Q8NFU1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST2Q8NFU1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
BEST2Q8NFU1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms