Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 SNHG9-202ENST00000564014 471 ntBASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 AC027612.4-201ENST00000605371 583 ntBASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 AC010327.5-201ENST00000586923 3061 ntBASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LSMEM1Q8N8F7 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 Z97205.2-201ENST00000564697 1639 ntBASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 AL080243.2-201ENST00000418783 582 ntBASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 SERBP1P3-201ENST00000459980 809 ntBASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 AL589739.1-201ENST00000607720 493 ntBASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 LINC00628-201ENST00000628516 1289 ntBASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LSMEM1Q8N8F7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 AP002414.2-201ENST00000591780 3365 ntBASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LSMEM1Q8N8F7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms