Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 TNRC18P2-201ENST00000417666 2714 ntBASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 CROCCP4-201ENST00000457096 498 ntBASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 SLED1-202ENST00000512051 380 ntBASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 AL450472.2-201ENST00000603663 1156 ntBASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 LINC02228-204ENST00000642115 2962 ntBASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 LINC02447-202ENST00000501888 2146 ntBASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PHTF2Q8N3S3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.14■□□□□ 0.18
PHTF2Q8N3S3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PHTF2Q8N3S3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 ANKRD19P-201ENST00000338192 862 ntBASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 AL359711.2-201ENST00000563105 872 ntBASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 AC132872.1-201ENST00000566986 1195 ntBASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 AC124283.3-201ENST00000570869 594 ntBASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 BTNL10-201ENST00000595971 695 ntBASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 MIR6775-201ENST00000617557 69 ntBASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PHTF2Q8N3S3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 KRT8P22-201ENST00000562317 1415 ntBASIC16.13■□□□□ 0.17
PHTF2Q8N3S3 PPT1-215ENST00000641471 2368 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms