Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 MIR648-201ENST00000385046 94 ntBASIC19.23■□□□□ 0.67
COL23A1Q86Y22 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 AC009779.1-201ENST00000551138 283 ntBASIC19.23■□□□□ 0.67
COL23A1Q86Y22 DNM1P30-201ENST00000563586 452 ntBASIC19.23■□□□□ 0.67
COL23A1Q86Y22 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 AC242376.2-201ENST00000619355 883 ntBASIC19.23■□□□□ 0.67
COL23A1Q86Y22 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL23A1Q86Y22 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 OR2K2-202ENST00000374428 1038 ntBASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 MIR1227-201ENST00000408484 88 ntBASIC19.22■□□□□ 0.67
COL23A1Q86Y22 VDAC1P1-201ENST00000439229 848 ntBASIC19.22■□□□□ 0.67
COL23A1Q86Y22 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 HLA-J-204ENST00000495278 958 ntBASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AC005357.2-202ENST00000590507 1060 ntBASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AL603764.1-201ENST00000636452 321 ntBASIC19.22■□□□□ 0.67
COL23A1Q86Y22 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 FKBP4P6-201ENST00000457486 1332 ntBASIC19.22■□□□□ 0.67
COL23A1Q86Y22 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COL23A1Q86Y22 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 RPS9P1-201ENST00000419943 583 ntBASIC19.21■□□□□ 0.67
COL23A1Q86Y22 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 RPL7P35-201ENST00000446943 740 ntBASIC19.21■□□□□ 0.67
COL23A1Q86Y22 E2F3P2-201ENST00000447755 1422 ntBASIC19.21■□□□□ 0.67
COL23A1Q86Y22 AP000593.2-201ENST00000542775 1433 ntBASIC19.21■□□□□ 0.67
COL23A1Q86Y22 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL23A1Q86Y22 AC074138.1-201ENST00000611182 1303 ntBASIC19.21■□□□□ 0.67
COL23A1Q86Y22 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.2■□□□□ 0.66
COL23A1Q86Y22 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms