Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 AC023310.3-201ENST00000557027 670 ntBASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 AC100756.1-201ENST00000562736 682 ntBASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 AC138749.3-201ENST00000567691 622 ntBASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 AC116165.1-201ENST00000611806 668 ntBASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD3Q7Z3D4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
LYSMD3Q7Z3D4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.71■□□□□ 0.1
LYSMD3Q7Z3D4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 TPRX2P-201ENST00000535362 881 ntBASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 AL158212.4-201ENST00000624062 1286 ntBASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD3Q7Z3D4 AC136621.1-201ENST00000624017 2304 ntBASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 AC022532.1-201ENST00000624563 1728 ntBASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 AC073347.1-201ENST00000421633 2643 ntBASIC15.69■□□□□ 0.1
LYSMD3Q7Z3D4 AC006058.4-201ENST00000624016 1670 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms