Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 MIR4313-201ENST00000580760 101 ntBASIC16.62■□□□□ 0.25
VSTM1Q6UX27 CTBP2P3-201ENST00000585629 1255 ntBASIC16.62■□□□□ 0.25
VSTM1Q6UX27 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 MIR8072-201ENST00000614241 80 ntBASIC16.62■□□□□ 0.25
VSTM1Q6UX27 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 FAM45BP-202ENST00000592932 1624 ntBASIC16.62■□□□□ 0.25
VSTM1Q6UX27 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 AC136621.1-201ENST00000624017 2304 ntBASIC16.62■□□□□ 0.25
VSTM1Q6UX27 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
VSTM1Q6UX27 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 AC006486.2-201ENST00000624246 2199 ntBASIC16.61■□□□□ 0.25
VSTM1Q6UX27 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
VSTM1Q6UX27 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 AL442647.2-201ENST00000429864 857 ntBASIC16.6■□□□□ 0.25
VSTM1Q6UX27 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 KRT18P43-201ENST00000469825 1281 ntBASIC16.6■□□□□ 0.25
VSTM1Q6UX27 FAM86LP-201ENST00000478302 853 ntBASIC16.6■□□□□ 0.25
VSTM1Q6UX27 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 AC000095.1-201ENST00000603208 874 ntBASIC16.6■□□□□ 0.25
VSTM1Q6UX27 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VSTM1Q6UX27 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms