Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 KRT8P35-201ENST00000483942 1338 ntBASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 C2orf27AP3-201ENST00000434123 579 ntBASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 AC114812.1-204ENST00000449669 728 ntBASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 AL354718.3-201ENST00000616414 581 ntBASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 CR382287.1-201ENST00000623954 586 ntBASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 AC007787.1-201ENST00000588095 1583 ntBASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 RNU1-114P-201ENST00000365297 166 ntBASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 AL645937.2-201ENST00000396808 931 ntBASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SLC27A1Q6PCB7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.77■□□□□ 0.27
SLC27A1Q6PCB7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 ACTBP8-201ENST00000403258 1108 ntBASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 KLF2P2-201ENST00000416807 1039 ntBASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC27A1Q6PCB7 KRT90P-201ENST00000549264 1064 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms