Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC38Q5VT99 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.2■□□□□ 0.18
LRRC38Q5VT99 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC38Q5VT99 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC38Q5VT99 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC38Q5VT99 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC38Q5VT99 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LRRC38Q5VT99 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC38Q5VT99 AC087499.5-201ENST00000452760 1342 ntBASIC16.19■□□□□ 0.18
LRRC38Q5VT99 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AL121723.1-201ENST00000445194 1519 ntBASIC16.19■□□□□ 0.18
LRRC38Q5VT99 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AJ011931.1-201ENST00000618749 2492 ntBASIC16.19■□□□□ 0.18
LRRC38Q5VT99 REXO1L2P-201ENST00000425429 2069 ntBASIC16.19■□□□□ 0.18
LRRC38Q5VT99 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AC125807.1-201ENST00000483097 614 ntBASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AC069120.2-201ENST00000524091 540 ntBASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AC025181.2-201ENST00000606994 802 ntBASIC16.19■□□□□ 0.18
LRRC38Q5VT99 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC38Q5VT99 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 AC000095.1-201ENST00000603208 874 ntBASIC16.18■□□□□ 0.18
LRRC38Q5VT99 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 ACE3P-201ENST00000423435 1973 ntBASIC16.18■□□□□ 0.18
LRRC38Q5VT99 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC38Q5VT99 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 AC007292.2-201ENST00000593524 1812 ntBASIC16.17■□□□□ 0.18
LRRC38Q5VT99 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 AC012508.2-201ENST00000567613 1472 ntBASIC16.17■□□□□ 0.18
LRRC38Q5VT99 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC38Q5VT99 AC107890.1-201ENST00000422478 521 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms