Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
EXT1Q16394 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.38□□□□□ -0.11
EXT1Q16394 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
EXT1Q16394 NUS1P3-201ENST00000423502 862 ntBASIC14.38□□□□□ -0.11
EXT1Q16394 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.38□□□□□ -0.11
EXT1Q16394 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 AC012441.1-201ENST00000446669 685 ntBASIC14.38□□□□□ -0.11
EXT1Q16394 AC093433.1-201ENST00000458048 571 ntBASIC14.38□□□□□ -0.11
EXT1Q16394 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.38□□□□□ -0.11
EXT1Q16394 KRT18P25-201ENST00000508931 1278 ntBASIC14.38□□□□□ -0.11
EXT1Q16394 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.38□□□□□ -0.11
EXT1Q16394 AP001582.1-201ENST00000525856 295 ntBASIC14.38□□□□□ -0.11
EXT1Q16394 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
EXT1Q16394 AP005019.2-201ENST00000615104 511 ntBASIC14.38□□□□□ -0.11
EXT1Q16394 BX539320.1-201ENST00000623759 877 ntBASIC14.38□□□□□ -0.11
EXT1Q16394 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.38□□□□□ -0.11
EXT1Q16394 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EXT1Q16394 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.38□□□□□ -0.11
EXT1Q16394 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
EXT1Q16394 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
EXT1Q16394 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.38□□□□□ -0.11
EXT1Q16394 AC084364.1-201ENST00000551967 1556 ntBASIC14.38□□□□□ -0.11
EXT1Q16394 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
EXT1Q16394 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
EXT1Q16394 AC134312.5-201ENST00000568031 1313 ntBASIC14.38□□□□□ -0.11
EXT1Q16394 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.38□□□□□ -0.11
EXT1Q16394 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EXT1Q16394 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.37□□□□□ -0.11
EXT1Q16394 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
EXT1Q16394 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 AP005117.1-202ENST00000581724 1908 ntBASIC14.37□□□□□ -0.11
EXT1Q16394 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
EXT1Q16394 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
EXT1Q16394 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
EXT1Q16394 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.37□□□□□ -0.11
EXT1Q16394 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 AC022137.2-201ENST00000503482 481 ntBASIC14.37□□□□□ -0.11
EXT1Q16394 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.37□□□□□ -0.11
EXT1Q16394 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.37□□□□□ -0.11
EXT1Q16394 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.37□□□□□ -0.11
EXT1Q16394 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.37□□□□□ -0.11
EXT1Q16394 AP005482.1-201ENST00000563722 1273 ntBASIC14.37□□□□□ -0.11
EXT1Q16394 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
EXT1Q16394 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.37□□□□□ -0.11
EXT1Q16394 AL645728.2-202ENST00000641679 227 ntBASIC14.37□□□□□ -0.11
EXT1Q16394 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.37□□□□□ -0.11
EXT1Q16394 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
EXT1Q16394 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
EXT1Q16394 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EXT1Q16394 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 AP003680.1-201ENST00000598970 3660 ntBASIC14.37□□□□□ -0.11
EXT1Q16394 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
EXT1Q16394 CICP6-201ENST00000457191 2729 ntBASIC14.36□□□□□ -0.11
EXT1Q16394 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.36□□□□□ -0.11
EXT1Q16394 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EXT1Q16394 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
EXT1Q16394 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EXT1Q16394 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
EXT1Q16394 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EXT1Q16394 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EXT1Q16394 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EXT1Q16394 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.36□□□□□ -0.11
EXT1Q16394 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EXT1Q16394 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms