Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.67■□□□□ 0.26
CDR2Q01850 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.67■□□□□ 0.26
CDR2Q01850 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDR2Q01850 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 AC093028.1-201ENST00000622998 982 ntBASIC16.67■□□□□ 0.26
CDR2Q01850 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.67■□□□□ 0.26
CDR2Q01850 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.67■□□□□ 0.26
CDR2Q01850 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDR2Q01850 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CDR2Q01850 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.66■□□□□ 0.26
CDR2Q01850 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.66■□□□□ 0.26
CDR2Q01850 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.66■□□□□ 0.26
CDR2Q01850 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.66■□□□□ 0.26
CDR2Q01850 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.66■□□□□ 0.26
CDR2Q01850 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.66■□□□□ 0.26
CDR2Q01850 AC015922.1-201ENST00000421102 1152 ntBASIC16.66■□□□□ 0.26
CDR2Q01850 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.66■□□□□ 0.26
CDR2Q01850 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.66■□□□□ 0.26
CDR2Q01850 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.66■□□□□ 0.26
CDR2Q01850 AC067863.1-201ENST00000494933 530 ntBASIC16.66■□□□□ 0.26
CDR2Q01850 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.66■□□□□ 0.26
CDR2Q01850 AC027369.6-201ENST00000525520 931 ntBASIC16.66■□□□□ 0.26
CDR2Q01850 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.66■□□□□ 0.26
CDR2Q01850 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.66■□□□□ 0.26
CDR2Q01850 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.66■□□□□ 0.26
CDR2Q01850 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.66■□□□□ 0.26
CDR2Q01850 LINC01115-203ENST00000606068 577 ntBASIC16.66■□□□□ 0.26
CDR2Q01850 AC074044.1-201ENST00000609673 707 ntBASIC16.66■□□□□ 0.26
CDR2Q01850 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.66■□□□□ 0.26
CDR2Q01850 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.66■□□□□ 0.26
CDR2Q01850 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CDR2Q01850 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDR2Q01850 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDR2Q01850 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CDR2Q01850 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
CDR2Q01850 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDR2Q01850 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
CDR2Q01850 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.65■□□□□ 0.26
CDR2Q01850 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.65■□□□□ 0.26
CDR2Q01850 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.65■□□□□ 0.26
CDR2Q01850 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDR2Q01850 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.65■□□□□ 0.26
CDR2Q01850 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CDR2Q01850 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CDR2Q01850 AC092580.3-201ENST00000430932 139 ntBASIC16.65■□□□□ 0.26
CDR2Q01850 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.65■□□□□ 0.26
CDR2Q01850 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 AC015910.1-201ENST00000579400 975 ntBASIC16.65■□□□□ 0.26
CDR2Q01850 AF228730.6-201ENST00000641497 218 ntBASIC16.65■□□□□ 0.26
CDR2Q01850 AC084121.3-201ENST00000641716 218 ntBASIC16.65■□□□□ 0.26
CDR2Q01850 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.65■□□□□ 0.26
CDR2Q01850 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDR2Q01850 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms