Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AC097493.3-201ENST00000509725 367 ntBASIC17.45■□□□□ 0.38
ASIC1P78348 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.45■□□□□ 0.38
ASIC1P78348 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.45■□□□□ 0.38
ASIC1P78348 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.45■□□□□ 0.38
ASIC1P78348 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.45■□□□□ 0.38
ASIC1P78348 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.45■□□□□ 0.38
ASIC1P78348 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.45■□□□□ 0.38
ASIC1P78348 LINC01115-203ENST00000606068 577 ntBASIC17.45■□□□□ 0.38
ASIC1P78348 AL158211.3-201ENST00000607385 239 ntBASIC17.45■□□□□ 0.38
ASIC1P78348 AF228730.6-201ENST00000641497 218 ntBASIC17.45■□□□□ 0.38
ASIC1P78348 AC084121.3-201ENST00000641716 218 ntBASIC17.45■□□□□ 0.38
ASIC1P78348 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ASIC1P78348 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ASIC1P78348 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ASIC1P78348 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
ASIC1P78348 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.45■□□□□ 0.38
ASIC1P78348 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ASIC1P78348 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ASIC1P78348 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ASIC1P78348 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ASIC1P78348 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.45■□□□□ 0.38
ASIC1P78348 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ASIC1P78348 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ASIC1P78348 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ASIC1P78348 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ASIC1P78348 AC084364.1-201ENST00000551967 1556 ntBASIC17.45■□□□□ 0.38
ASIC1P78348 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ASIC1P78348 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ASIC1P78348 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.44■□□□□ 0.38
ASIC1P78348 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ASIC1P78348 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.44■□□□□ 0.38
ASIC1P78348 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 AC126365.1-201ENST00000578585 1514 ntBASIC17.44■□□□□ 0.38
ASIC1P78348 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.44■□□□□ 0.38
ASIC1P78348 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ASIC1P78348 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
ASIC1P78348 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.44■□□□□ 0.38
ASIC1P78348 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.44■□□□□ 0.38
ASIC1P78348 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.44■□□□□ 0.38
ASIC1P78348 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.44■□□□□ 0.38
ASIC1P78348 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.44■□□□□ 0.38
ASIC1P78348 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.44■□□□□ 0.38
ASIC1P78348 IGHV3-42-201ENST00000520410 361 ntBASIC17.44■□□□□ 0.38
ASIC1P78348 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.44■□□□□ 0.38
ASIC1P78348 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.44■□□□□ 0.38
ASIC1P78348 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.44■□□□□ 0.38
ASIC1P78348 AC074044.1-201ENST00000609673 707 ntBASIC17.44■□□□□ 0.38
ASIC1P78348 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.44■□□□□ 0.38
ASIC1P78348 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.44■□□□□ 0.38
ASIC1P78348 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.44■□□□□ 0.38
ASIC1P78348 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ASIC1P78348 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ASIC1P78348 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.44■□□□□ 0.38
ASIC1P78348 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.44■□□□□ 0.38
ASIC1P78348 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.44■□□□□ 0.38
ASIC1P78348 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ASIC1P78348 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 AC023024.2-201ENST00000623561 1993 ntBASIC17.44■□□□□ 0.38
ASIC1P78348 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ASIC1P78348 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 AL161772.1-201ENST00000610494 4412 ntBASIC17.44■□□□□ 0.38
ASIC1P78348 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ASIC1P78348 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.43■□□□□ 0.38
ASIC1P78348 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ASIC1P78348 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 PCDHA3-202ENST00000532566 4594 ntBASIC17.43■□□□□ 0.38
ASIC1P78348 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 RPL13P2-201ENST00000440687 659 ntBASIC17.43■□□□□ 0.38
ASIC1P78348 DUX4L27-201ENST00000554796 1261 ntBASIC17.43■□□□□ 0.38
ASIC1P78348 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.43■□□□□ 0.38
ASIC1P78348 AL844908.2-201ENST00000609461 460 ntBASIC17.43■□□□□ 0.38
ASIC1P78348 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.43■□□□□ 0.38
ASIC1P78348 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.43■□□□□ 0.38
ASIC1P78348 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.43■□□□□ 0.38
ASIC1P78348 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.43■□□□□ 0.38
ASIC1P78348 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ASIC1P78348 AC100757.3-201ENST00000622361 1406 ntBASIC17.43■□□□□ 0.38
ASIC1P78348 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ASIC1P78348 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms