Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.11□□□□□ -0.63
RPL39P62891 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RPL39P62891 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
RPL39P62891 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RPL39P62891 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RPL39P62891 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.1□□□□□ -0.63
RPL39P62891 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.1□□□□□ -0.63
RPL39P62891 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 AKR1C7P-201ENST00000305623 895 ntBASIC11.1□□□□□ -0.63
RPL39P62891 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.1□□□□□ -0.63
RPL39P62891 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 AF238378.1-201ENST00000526806 358 ntBASIC11.1□□□□□ -0.63
RPL39P62891 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
RPL39P62891 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.1□□□□□ -0.63
RPL39P62891 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.1□□□□□ -0.63
RPL39P62891 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.1□□□□□ -0.63
RPL39P62891 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.1□□□□□ -0.63
RPL39P62891 MIR3652-201ENST00000579335 131 ntBASIC11.1□□□□□ -0.63
RPL39P62891 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 AL009183.1-201ENST00000603760 355 ntBASIC11.1□□□□□ -0.63
RPL39P62891 AC008735.5-201ENST00000623544 497 ntBASIC11.1□□□□□ -0.63
RPL39P62891 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.1□□□□□ -0.63
RPL39P62891 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.1□□□□□ -0.63
RPL39P62891 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 AC087386.2-201ENST00000623212 4637 ntBASIC11.1□□□□□ -0.63
RPL39P62891 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.1□□□□□ -0.63
RPL39P62891 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RPL39P62891 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RPL39P62891 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RPL39P62891 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.09□□□□□ -0.63
RPL39P62891 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 AC006504.5-208ENST00000588784 2401 ntBASIC11.09□□□□□ -0.63
RPL39P62891 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
RPL39P62891 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.09□□□□□ -0.63
RPL39P62891 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.09□□□□□ -0.63
RPL39P62891 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 AC073648.2-201ENST00000510116 352 ntBASIC11.09□□□□□ -0.63
RPL39P62891 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPL39P62891 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.09□□□□□ -0.63
RPL39P62891 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.09□□□□□ -0.63
RPL39P62891 AC109635.5-201ENST00000533593 962 ntBASIC11.09□□□□□ -0.63
RPL39P62891 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
RPL39P62891 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.09□□□□□ -0.63
RPL39P62891 AC105339.3-201ENST00000560043 636 ntBASIC11.09□□□□□ -0.63
RPL39P62891 AC091304.2-201ENST00000564639 760 ntBASIC11.09□□□□□ -0.63
RPL39P62891 MIR4751-201ENST00000578027 74 ntBASIC11.09□□□□□ -0.63
RPL39P62891 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms