Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.91■□□□□ 0.46
CHMP4BP1P59074 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.9■□□□□ 0.46
CHMP4BP1P59074 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 AC025048.3-201ENST00000590609 569 ntBASIC17.9■□□□□ 0.46
CHMP4BP1P59074 MIR6805-201ENST00000615055 62 ntBASIC17.9■□□□□ 0.46
CHMP4BP1P59074 AC005702.4-201ENST00000618393 416 ntBASIC17.9■□□□□ 0.46
CHMP4BP1P59074 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHMP4BP1P59074 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.9■□□□□ 0.46
CHMP4BP1P59074 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CHMP4BP1P59074 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
CHMP4BP1P59074 CDC14C-201ENST00000428251 1719 ntBASIC17.89■□□□□ 0.46
CHMP4BP1P59074 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP4BP1P59074 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CHMP4BP1P59074 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP4BP1P59074 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.89■□□□□ 0.46
CHMP4BP1P59074 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP4BP1P59074 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CHMP4BP1P59074 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4BP1P59074 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4BP1P59074 AC013268.4-201ENST00000637413 2228 ntBASIC17.88■□□□□ 0.45
CHMP4BP1P59074 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP4BP1P59074 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP4BP1P59074 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHMP4BP1P59074 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms