Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.62□□□□□ -0.55
CMC4P56277 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
CMC4P56277 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.62□□□□□ -0.55
CMC4P56277 AC134915.1-201ENST00000426461 574 ntBASIC11.62□□□□□ -0.55
CMC4P56277 AL442647.2-201ENST00000429864 857 ntBASIC11.62□□□□□ -0.55
CMC4P56277 UGT1A2P-201ENST00000454886 866 ntBASIC11.62□□□□□ -0.55
CMC4P56277 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.62□□□□□ -0.55
CMC4P56277 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.62□□□□□ -0.55
CMC4P56277 ENPP7P5-201ENST00000541031 1031 ntBASIC11.62□□□□□ -0.55
CMC4P56277 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.62□□□□□ -0.55
CMC4P56277 AC138761.1-201ENST00000584393 385 ntBASIC11.62□□□□□ -0.55
CMC4P56277 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.62□□□□□ -0.55
CMC4P56277 AC133539.2-201ENST00000604757 467 ntBASIC11.62□□□□□ -0.55
CMC4P56277 AL158212.4-201ENST00000624062 1286 ntBASIC11.62□□□□□ -0.55
CMC4P56277 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CMC4P56277 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CMC4P56277 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.62□□□□□ -0.55
CMC4P56277 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CMC4P56277 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.62□□□□□ -0.55
CMC4P56277 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CMC4P56277 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC11.62□□□□□ -0.55
CMC4P56277 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
CMC4P56277 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
CMC4P56277 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
CMC4P56277 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 AC004066.1-201ENST00000502488 802 ntBASIC11.61□□□□□ -0.55
CMC4P56277 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
CMC4P56277 AC123567.1-201ENST00000548294 1261 ntBASIC11.61□□□□□ -0.55
CMC4P56277 AC023310.3-201ENST00000557027 670 ntBASIC11.61□□□□□ -0.55
CMC4P56277 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.61□□□□□ -0.55
CMC4P56277 AC100756.1-201ENST00000562736 682 ntBASIC11.61□□□□□ -0.55
CMC4P56277 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 AC138749.3-201ENST00000567691 622 ntBASIC11.61□□□□□ -0.55
CMC4P56277 TP53TG3HP-202ENST00000569755 579 ntBASIC11.61□□□□□ -0.55
CMC4P56277 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.61□□□□□ -0.55
CMC4P56277 AC116165.1-201ENST00000611806 668 ntBASIC11.61□□□□□ -0.55
CMC4P56277 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.61□□□□□ -0.55
CMC4P56277 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.61□□□□□ -0.55
CMC4P56277 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CMC4P56277 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 AC087481.3-201ENST00000602886 1894 ntBASIC11.61□□□□□ -0.55
CMC4P56277 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CMC4P56277 AC010491.1-201ENST00000563101 2797 ntBASIC11.61□□□□□ -0.55
CMC4P56277 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
CMC4P56277 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
CMC4P56277 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CMC4P56277 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CMC4P56277 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.6□□□□□ -0.55
CMC4P56277 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CMC4P56277 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms