Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDH12P55289 TIMM8BP1-201ENST00000452384 211 ntBASIC14.62□□□□□ -0.07
CDH12P55289 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 IGHV3-62-201ENST00000520057 340 ntBASIC14.62□□□□□ -0.07
CDH12P55289 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH12P55289 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH12P55289 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.62□□□□□ -0.07
CDH12P55289 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH12P55289 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 LINC00552-201ENST00000625151 2579 ntBASIC14.62□□□□□ -0.07
CDH12P55289 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH12P55289 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH12P55289 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH12P55289 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 AL136982.4-201ENST00000437689 1740 ntBASIC14.61□□□□□ -0.07
CDH12P55289 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CDH12P55289 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDH12P55289 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDH12P55289 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDH12P55289 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 AC004987.2-201ENST00000395959 1148 ntBASIC14.61□□□□□ -0.07
CDH12P55289 AC004832.2-201ENST00000426397 482 ntBASIC14.61□□□□□ -0.07
CDH12P55289 AL645939.2-201ENST00000427340 991 ntBASIC14.61□□□□□ -0.07
CDH12P55289 ACTG1P14-201ENST00000446382 1122 ntBASIC14.61□□□□□ -0.07
CDH12P55289 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.61□□□□□ -0.07
CDH12P55289 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CDH12P55289 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDH12P55289 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH12P55289 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH12P55289 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
CDH12P55289 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH12P55289 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH12P55289 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH12P55289 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH12P55289 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDH12P55289 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH12P55289 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH12P55289 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 HLA-H-201ENST00000383620 1096 ntBASIC14.6□□□□□ -0.07
CDH12P55289 RPS8P6-201ENST00000426177 609 ntBASIC14.6□□□□□ -0.07
CDH12P55289 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH12P55289 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.6□□□□□ -0.07
CDH12P55289 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH12P55289 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH12P55289 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 KRT8P23-201ENST00000560090 1207 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms