Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.03■□□□□ 0.32
BRCA2P51587 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
BRCA2P51587 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCA2P51587 CICP11-201ENST00000434745 2827 ntBASIC17.03■□□□□ 0.32
BRCA2P51587 LTB4R2-202ENST00000528054 3092 ntBASIC17.03■□□□□ 0.32
BRCA2P51587 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
BRCA2P51587 AL139094.1-201ENST00000405549 1188 ntBASIC17.03■□□□□ 0.32
BRCA2P51587 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.03■□□□□ 0.32
BRCA2P51587 OR10B1P-201ENST00000601666 907 ntBASIC17.03■□□□□ 0.32
BRCA2P51587 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.03■□□□□ 0.32
BRCA2P51587 AC244250.3-201ENST00000620749 366 ntBASIC17.03■□□□□ 0.32
BRCA2P51587 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.03■□□□□ 0.32
BRCA2P51587 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 CLUHP2-201ENST00000426660 1303 ntBASIC17.03■□□□□ 0.32
BRCA2P51587 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.03■□□□□ 0.32
BRCA2P51587 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.03■□□□□ 0.32
BRCA2P51587 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.03■□□□□ 0.32
BRCA2P51587 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.03■□□□□ 0.32
BRCA2P51587 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BRCA2P51587 LRRC59-203ENST00000576448 1531 ntBASIC17.02■□□□□ 0.32
BRCA2P51587 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCA2P51587 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCA2P51587 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BRCA2P51587 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.02■□□□□ 0.32
BRCA2P51587 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.02■□□□□ 0.32
BRCA2P51587 AC114812.1-204ENST00000449669 728 ntBASIC17.02■□□□□ 0.32
BRCA2P51587 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.02■□□□□ 0.32
BRCA2P51587 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.02■□□□□ 0.32
BRCA2P51587 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.02■□□□□ 0.32
BRCA2P51587 AC025262.2-201ENST00000623975 1056 ntBASIC17.02■□□□□ 0.32
BRCA2P51587 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
BRCA2P51587 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.02■□□□□ 0.32
BRCA2P51587 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.02■□□□□ 0.32
BRCA2P51587 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
BRCA2P51587 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.02■□□□□ 0.32
BRCA2P51587 MIR557-201ENST00000385239 98 ntBASIC17.02■□□□□ 0.32
BRCA2P51587 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.02■□□□□ 0.32
BRCA2P51587 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.02■□□□□ 0.32
BRCA2P51587 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.02■□□□□ 0.32
BRCA2P51587 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.02■□□□□ 0.32
BRCA2P51587 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BRCA2P51587 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.02■□□□□ 0.31
BRCA2P51587 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
BRCA2P51587 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
BRCA2P51587 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRCA2P51587 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.02■□□□□ 0.31
BRCA2P51587 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRCA2P51587 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BRCA2P51587 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BRCA2P51587 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BRCA2P51587 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.02■□□□□ 0.31
BRCA2P51587 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
BRCA2P51587 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.02■□□□□ 0.31
BRCA2P51587 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.02■□□□□ 0.31
BRCA2P51587 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.02■□□□□ 0.31
BRCA2P51587 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BRCA2P51587 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BRCA2P51587 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
BRCA2P51587 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCA2P51587 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
BRCA2P51587 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.01■□□□□ 0.31
BRCA2P51587 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.01■□□□□ 0.31
BRCA2P51587 ALG1L6P-201ENST00000515248 758 ntBASIC17.01■□□□□ 0.31
BRCA2P51587 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.01■□□□□ 0.31
BRCA2P51587 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
BRCA2P51587 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 AC010141.1-201ENST00000411585 623 ntBASIC17.01■□□□□ 0.31
BRCA2P51587 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.01■□□□□ 0.31
BRCA2P51587 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.01■□□□□ 0.31
BRCA2P51587 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCA2P51587 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.01■□□□□ 0.31
BRCA2P51587 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.01■□□□□ 0.31
BRCA2P51587 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BRCA2P51587 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms