Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HLCSP50747 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLCSP50747 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HLCSP50747 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
HLCSP50747 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HLCSP50747 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HLCSP50747 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.99□□□□□ -0.01
HLCSP50747 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.99□□□□□ -0.01
HLCSP50747 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.99□□□□□ -0.01
HLCSP50747 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.99□□□□□ -0.01
HLCSP50747 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HLCSP50747 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.99□□□□□ -0.01
HLCSP50747 AC105021.1-202ENST00000570572 669 ntBASIC14.99□□□□□ -0.01
HLCSP50747 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.99□□□□□ -0.01
HLCSP50747 RN7SL828P-201ENST00000607615 303 ntBASIC14.99□□□□□ -0.01
HLCSP50747 SPDYE12P-201ENST00000618416 771 ntBASIC14.99□□□□□ -0.01
HLCSP50747 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.99□□□□□ -0.01
HLCSP50747 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.99□□□□□ -0.01
HLCSP50747 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HLCSP50747 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HLCSP50747 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
HLCSP50747 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HLCSP50747 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.99□□□□□ -0.01
HLCSP50747 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HLCSP50747 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.98□□□□□ -0.01
HLCSP50747 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.98□□□□□ -0.01
HLCSP50747 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.98□□□□□ -0.01
HLCSP50747 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.98□□□□□ -0.01
HLCSP50747 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HLCSP50747 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.98□□□□□ -0.01
HLCSP50747 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.98□□□□□ -0.01
HLCSP50747 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLCSP50747 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HLCSP50747 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.98□□□□□ -0.01
HLCSP50747 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLCSP50747 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 MTND6P24-201ENST00000440466 518 ntBASIC14.98□□□□□ -0.01
HLCSP50747 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HLCSP50747 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.98□□□□□ -0.01
HLCSP50747 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.98□□□□□ -0.01
HLCSP50747 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.98□□□□□ -0.01
HLCSP50747 AL138828.2-201ENST00000615812 383 ntBASIC14.98□□□□□ -0.01
HLCSP50747 AL590560.3-201ENST00000623350 461 ntBASIC14.98□□□□□ -0.01
HLCSP50747 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HLCSP50747 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.98□□□□□ -0.01
HLCSP50747 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HLCSP50747 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.98□□□□□ -0.01
HLCSP50747 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 AC100757.3-201ENST00000622361 1406 ntBASIC14.98□□□□□ -0.01
HLCSP50747 CETN4P-206ENST00000642099 2168 ntBASIC14.98□□□□□ -0.01
HLCSP50747 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.98□□□□□ -0.01
HLCSP50747 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.98□□□□□ -0.01
HLCSP50747 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLCSP50747 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.98□□□□□ -0.01
HLCSP50747 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms