Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.17■□□□□ 0.34
CDK7P50613 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 POM121L10P-201ENST00000436994 1285 ntBASIC17.17■□□□□ 0.34
CDK7P50613 CNN2P10-201ENST00000443067 918 ntBASIC17.17■□□□□ 0.34
CDK7P50613 EIF4HP1-201ENST00000453115 687 ntBASIC17.17■□□□□ 0.34
CDK7P50613 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.17■□□□□ 0.34
CDK7P50613 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 CHMP4BP1-201ENST00000556017 588 ntBASIC17.17■□□□□ 0.34
CDK7P50613 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.17■□□□□ 0.34
CDK7P50613 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.17■□□□□ 0.34
CDK7P50613 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CDK7P50613 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDK7P50613 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.17■□□□□ 0.34
CDK7P50613 LINC00554-201ENST00000564841 3011 ntBASIC17.17■□□□□ 0.34
CDK7P50613 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.16■□□□□ 0.34
CDK7P50613 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.16■□□□□ 0.34
CDK7P50613 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDK7P50613 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDK7P50613 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.16■□□□□ 0.34
CDK7P50613 UPF3AP2-201ENST00000457924 1132 ntBASIC17.16■□□□□ 0.34
CDK7P50613 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.16■□□□□ 0.34
CDK7P50613 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CDK7P50613 RN7SL48P-201ENST00000579283 293 ntBASIC17.16■□□□□ 0.34
CDK7P50613 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
CDK7P50613 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDK7P50613 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.16■□□□□ 0.34
CDK7P50613 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDK7P50613 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CDK7P50613 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK7P50613 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK7P50613 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDK7P50613 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK7P50613 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDK7P50613 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CDK7P50613 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK7P50613 HSPB1P2-201ENST00000448722 546 ntBASIC17.15■□□□□ 0.34
CDK7P50613 AC114812.1-204ENST00000449669 728 ntBASIC17.15■□□□□ 0.34
CDK7P50613 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 AC126915.1-201ENST00000522847 1038 ntBASIC17.15■□□□□ 0.34
CDK7P50613 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDK7P50613 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK7P50613 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK7P50613 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.15■□□□□ 0.34
CDK7P50613 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.15■□□□□ 0.34
CDK7P50613 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.15■□□□□ 0.34
CDK7P50613 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDK7P50613 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.15■□□□□ 0.34
CDK7P50613 AC008741.2-201ENST00000612792 3115 ntBASIC17.15■□□□□ 0.34
CDK7P50613 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.15■□□□□ 0.34
CDK7P50613 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDK7P50613 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDK7P50613 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDK7P50613 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDK7P50613 AC068418.2-201ENST00000577309 3703 ntBASIC17.14■□□□□ 0.34
CDK7P50613 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDK7P50613 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDK7P50613 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.14■□□□□ 0.34
CDK7P50613 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK7P50613 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK7P50613 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDK7P50613 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms