Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.32■□□□□ 0.52
MRE11P49959 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MRE11P49959 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
MRE11P49959 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRE11P49959 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MRE11P49959 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.31■□□□□ 0.52
MRE11P49959 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MRE11P49959 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.31■□□□□ 0.52
MRE11P49959 ZBED1P1-201ENST00000502364 1930 ntBASIC18.31■□□□□ 0.52
MRE11P49959 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MRE11P49959 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.31■□□□□ 0.52
MRE11P49959 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.31■□□□□ 0.52
MRE11P49959 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
MRE11P49959 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MRE11P49959 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MRE11P49959 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.31■□□□□ 0.52
MRE11P49959 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.31■□□□□ 0.52
MRE11P49959 AC091167.2-201ENST00000579581 588 ntBASIC18.31■□□□□ 0.52
MRE11P49959 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.31■□□□□ 0.52
MRE11P49959 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.31■□□□□ 0.52
MRE11P49959 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.31■□□□□ 0.52
MRE11P49959 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.31■□□□□ 0.52
MRE11P49959 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC18.31■□□□□ 0.52
MRE11P49959 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRE11P49959 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.3■□□□□ 0.52
MRE11P49959 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MRE11P49959 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 PMPCAP1-201ENST00000508114 1576 ntBASIC18.3■□□□□ 0.52
MRE11P49959 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MRE11P49959 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.3■□□□□ 0.52
MRE11P49959 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.3■□□□□ 0.52
MRE11P49959 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.3■□□□□ 0.52
MRE11P49959 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.3■□□□□ 0.52
MRE11P49959 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
MRE11P49959 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.3■□□□□ 0.52
MRE11P49959 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.3■□□□□ 0.52
MRE11P49959 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.3■□□□□ 0.52
MRE11P49959 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.3■□□□□ 0.52
MRE11P49959 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.3■□□□□ 0.52
MRE11P49959 AC087641.1-201ENST00000557561 1021 ntBASIC18.3■□□□□ 0.52
MRE11P49959 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.3■□□□□ 0.52
MRE11P49959 AC005498.2-205ENST00000593218 784 ntBASIC18.3■□□□□ 0.52
MRE11P49959 AC064836.3-201ENST00000607928 673 ntBASIC18.3■□□□□ 0.52
MRE11P49959 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.3■□□□□ 0.52
MRE11P49959 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.3■□□□□ 0.52
MRE11P49959 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MRE11P49959 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC18.3■□□□□ 0.52
MRE11P49959 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 MIR600HG-201ENST00000449175 5984 ntBASIC18.3■□□□□ 0.52
MRE11P49959 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 CICP17-201ENST00000418553 2377 ntBASIC18.3■□□□□ 0.52
MRE11P49959 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
MRE11P49959 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRE11P49959 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
MRE11P49959 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms