Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RABIFP47224 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RABIFP47224 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RABIFP47224 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.21■□□□□ 0.03
RABIFP47224 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RABIFP47224 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
RABIFP47224 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RABIFP47224 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.21■□□□□ 0.03
RABIFP47224 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RABIFP47224 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RABIFP47224 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RABIFP47224 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.21■□□□□ 0.03
RABIFP47224 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.21■□□□□ 0.03
RABIFP47224 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.21■□□□□ 0.03
RABIFP47224 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.21■□□□□ 0.03
RABIFP47224 AC138951.2-201ENST00000623455 1161 ntBASIC15.21■□□□□ 0.03
RABIFP47224 AL645728.2-202ENST00000641679 227 ntBASIC15.21■□□□□ 0.03
RABIFP47224 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RABIFP47224 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RABIFP47224 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RABIFP47224 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RABIFP47224 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
RABIFP47224 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RABIFP47224 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RABIFP47224 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.21■□□□□ 0.02
RABIFP47224 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RABIFP47224 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RABIFP47224 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RABIFP47224 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.21■□□□□ 0.02
RABIFP47224 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
RABIFP47224 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.21■□□□□ 0.02
RABIFP47224 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RABIFP47224 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.2■□□□□ 0.02
RABIFP47224 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RABIFP47224 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.2■□□□□ 0.02
RABIFP47224 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 AL138709.1-201ENST00000614840 1693 ntBASIC15.2■□□□□ 0.02
RABIFP47224 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 AC006001.1-201ENST00000325130 474 ntBASIC15.2■□□□□ 0.02
RABIFP47224 RNU1-114P-201ENST00000365297 166 ntBASIC15.2■□□□□ 0.02
RABIFP47224 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RABIFP47224 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RABIFP47224 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.2■□□□□ 0.02
RABIFP47224 MIR1908-201ENST00000410394 80 ntBASIC15.2■□□□□ 0.02
RABIFP47224 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.2■□□□□ 0.02
RABIFP47224 FAM197Y7-201ENST00000432892 766 ntBASIC15.2■□□□□ 0.02
RABIFP47224 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.2■□□□□ 0.02
RABIFP47224 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.2■□□□□ 0.02
RABIFP47224 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.2■□□□□ 0.02
RABIFP47224 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RABIFP47224 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.2■□□□□ 0.02
RABIFP47224 DUX4L45-201ENST00000566406 1057 ntBASIC15.2■□□□□ 0.02
RABIFP47224 MIR4525-201ENST00000580000 75 ntBASIC15.2■□□□□ 0.02
RABIFP47224 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.2■□□□□ 0.02
RABIFP47224 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.2■□□□□ 0.02
RABIFP47224 PRSS30P-206ENST00000641773 873 ntBASIC15.2■□□□□ 0.02
RABIFP47224 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.2■□□□□ 0.02
RABIFP47224 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.2■□□□□ 0.02
RABIFP47224 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RABIFP47224 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.2■□□□□ 0.02
RABIFP47224 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RABIFP47224 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.19■□□□□ 0.02
RABIFP47224 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.19■□□□□ 0.02
RABIFP47224 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.19■□□□□ 0.02
RABIFP47224 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RABIFP47224 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RABIFP47224 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.19■□□□□ 0.02
RABIFP47224 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.19■□□□□ 0.02
RABIFP47224 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.19■□□□□ 0.02
RABIFP47224 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RABIFP47224 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RABIFP47224 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.19■□□□□ 0.02
RABIFP47224 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
RABIFP47224 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.19■□□□□ 0.02
RABIFP47224 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RABIFP47224 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.19■□□□□ 0.02
RABIFP47224 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms