Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.78■□□□□ 0.44
COPB2P35606 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
COPB2P35606 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.78■□□□□ 0.44
COPB2P35606 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.78■□□□□ 0.44
COPB2P35606 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COPB2P35606 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.78■□□□□ 0.44
COPB2P35606 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.78■□□□□ 0.44
COPB2P35606 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.78■□□□□ 0.44
COPB2P35606 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.78■□□□□ 0.44
COPB2P35606 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.78■□□□□ 0.44
COPB2P35606 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.78■□□□□ 0.44
COPB2P35606 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.78■□□□□ 0.44
COPB2P35606 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COPB2P35606 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COPB2P35606 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
COPB2P35606 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.77■□□□□ 0.44
COPB2P35606 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
COPB2P35606 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
COPB2P35606 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.77■□□□□ 0.44
COPB2P35606 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.77■□□□□ 0.44
COPB2P35606 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.77■□□□□ 0.44
COPB2P35606 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 CD8B2-202ENST00000417670 633 ntBASIC17.77■□□□□ 0.44
COPB2P35606 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 AC114812.1-204ENST00000449669 728 ntBASIC17.77■□□□□ 0.44
COPB2P35606 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.77■□□□□ 0.44
COPB2P35606 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
COPB2P35606 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
COPB2P35606 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
COPB2P35606 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.77■□□□□ 0.44
COPB2P35606 AC103810.3-201ENST00000583567 96 ntBASIC17.77■□□□□ 0.44
COPB2P35606 AC145423.3-201ENST00000615987 467 ntBASIC17.77■□□□□ 0.44
COPB2P35606 AC138951.2-201ENST00000623455 1161 ntBASIC17.77■□□□□ 0.44
COPB2P35606 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
COPB2P35606 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COPB2P35606 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
COPB2P35606 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COPB2P35606 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
COPB2P35606 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
COPB2P35606 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COPB2P35606 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
COPB2P35606 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COPB2P35606 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COPB2P35606 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COPB2P35606 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.76■□□□□ 0.43
COPB2P35606 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.76■□□□□ 0.43
COPB2P35606 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
COPB2P35606 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COPB2P35606 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 LINC00554-201ENST00000564841 3011 ntBASIC17.76■□□□□ 0.43
COPB2P35606 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.76■□□□□ 0.43
COPB2P35606 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.76■□□□□ 0.43
COPB2P35606 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.76■□□□□ 0.43
COPB2P35606 ACTBP8-201ENST00000403258 1108 ntBASIC17.76■□□□□ 0.43
COPB2P35606 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.76■□□□□ 0.43
COPB2P35606 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.76■□□□□ 0.43
COPB2P35606 RPL13AP20-201ENST00000459725 609 ntBASIC17.76■□□□□ 0.43
COPB2P35606 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.76■□□□□ 0.43
COPB2P35606 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.76■□□□□ 0.43
COPB2P35606 AC108725.1-201ENST00000495472 409 ntBASIC17.76■□□□□ 0.43
COPB2P35606 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.76■□□□□ 0.43
COPB2P35606 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COPB2P35606 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
COPB2P35606 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.76■□□□□ 0.43
COPB2P35606 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.76■□□□□ 0.43
COPB2P35606 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.76■□□□□ 0.43
COPB2P35606 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.76■□□□□ 0.43
COPB2P35606 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms