Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CYMP-203ENST00000474680 1263 ntBASIC16.39■□□□□ 0.21
MMP8P22894 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.39■□□□□ 0.21
MMP8P22894 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP8P22894 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP8P22894 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP8P22894 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP8P22894 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MMP8P22894 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MMP8P22894 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MMP8P22894 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.39■□□□□ 0.21
MMP8P22894 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MMP8P22894 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
MMP8P22894 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP8P22894 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
MMP8P22894 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.38■□□□□ 0.21
MMP8P22894 AC104457.1-201ENST00000401024 814 ntBASIC16.38■□□□□ 0.21
MMP8P22894 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP8P22894 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.38■□□□□ 0.21
MMP8P22894 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MMP8P22894 AL512638.1-201ENST00000457493 794 ntBASIC16.38■□□□□ 0.21
MMP8P22894 AC093214.1-201ENST00000511688 1107 ntBASIC16.38■□□□□ 0.21
MMP8P22894 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP8P22894 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.38■□□□□ 0.21
MMP8P22894 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP8P22894 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MMP8P22894 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.38■□□□□ 0.21
MMP8P22894 AC004790.1-201ENST00000612686 536 ntBASIC16.38■□□□□ 0.21
MMP8P22894 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MMP8P22894 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP8P22894 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP8P22894 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MMP8P22894 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP8P22894 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MMP8P22894 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MMP8P22894 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
MMP8P22894 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP8P22894 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
MMP8P22894 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.37■□□□□ 0.21
MMP8P22894 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP8P22894 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 AC104794.3-201ENST00000566840 1248 ntBASIC16.37■□□□□ 0.21
MMP8P22894 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MMP8P22894 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MMP8P22894 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MMP8P22894 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 ZBED1P1-201ENST00000502364 1930 ntBASIC16.37■□□□□ 0.21
MMP8P22894 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 WASH3P-207ENST00000560956 1394 ntBASIC16.37■□□□□ 0.21
MMP8P22894 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP8P22894 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP8P22894 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MMP8P22894 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP8P22894 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MMP8P22894 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MMP8P22894 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP8P22894 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP8P22894 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
MMP8P22894 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms