Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 AC104581.4-201ENST00000623126 3052 ntBASIC15.73■□□□□ 0.11
KRT4P19013 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
KRT4P19013 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT4P19013 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT4P19013 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT4P19013 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT4P19013 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT4P19013 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT4P19013 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
KRT4P19013 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT4P19013 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT4P19013 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT4P19013 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT4P19013 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
KRT4P19013 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT4P19013 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.72■□□□□ 0.11
KRT4P19013 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 AC079776.4-201ENST00000511039 504 ntBASIC15.72■□□□□ 0.11
KRT4P19013 RNA5SP410-201ENST00000516285 106 ntBASIC15.72■□□□□ 0.11
KRT4P19013 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT4P19013 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.72■□□□□ 0.11
KRT4P19013 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.72■□□□□ 0.11
KRT4P19013 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
KRT4P19013 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT4P19013 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 AC068137.2-201ENST00000605408 478 ntBASIC15.72■□□□□ 0.11
KRT4P19013 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.72■□□□□ 0.11
KRT4P19013 AL691432.3-201ENST00000621860 400 ntBASIC15.72■□□□□ 0.11
KRT4P19013 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.72■□□□□ 0.11
KRT4P19013 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
KRT4P19013 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
KRT4P19013 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 WASH3P-207ENST00000560956 1394 ntBASIC15.72■□□□□ 0.11
KRT4P19013 FO538757.1-201ENST00000623083 1397 ntBASIC15.72■□□□□ 0.11
KRT4P19013 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT4P19013 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
KRT4P19013 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT4P19013 CICP11-201ENST00000434745 2827 ntBASIC15.72■□□□□ 0.11
KRT4P19013 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
KRT4P19013 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT4P19013 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
KRT4P19013 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
KRT4P19013 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT4P19013 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
KRT4P19013 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KRT4P19013 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KRT4P19013 AC002056.1-201ENST00000395613 760 ntBASIC15.71■□□□□ 0.11
KRT4P19013 MIR1224-201ENST00000408193 85 ntBASIC15.71■□□□□ 0.11
KRT4P19013 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
KRT4P19013 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.71■□□□□ 0.11
KRT4P19013 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.71■□□□□ 0.11
KRT4P19013 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT4P19013 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT4P19013 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KRT4P19013 AC097359.3-201ENST00000603982 1210 ntBASIC15.71■□□□□ 0.11
KRT4P19013 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT4P19013 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
KRT4P19013 INTS4P1-203ENST00000641008 3683 ntBASIC15.71■□□□□ 0.11
KRT4P19013 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT4P19013 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms