Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-DOBP13765 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-DOBP13765 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.02□□□□□ -0.16
HLA-DOBP13765 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.02□□□□□ -0.16
HLA-DOBP13765 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 MST1L-201ENST00000442552 2185 ntBASIC14.02□□□□□ -0.16
HLA-DOBP13765 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HLA-DOBP13765 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.02□□□□□ -0.16
HLA-DOBP13765 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-DOBP13765 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
HLA-DOBP13765 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HLA-DOBP13765 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HLA-DOBP13765 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HLA-DOBP13765 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DOBP13765 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DOBP13765 TSSK5P-201ENST00000423978 907 ntBASIC14.02□□□□□ -0.17
HLA-DOBP13765 RPL13P2-201ENST00000440687 659 ntBASIC14.02□□□□□ -0.17
HLA-DOBP13765 SLED1-202ENST00000512051 380 ntBASIC14.02□□□□□ -0.17
HLA-DOBP13765 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DOBP13765 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DOBP13765 AL390955.2-201ENST00000603032 514 ntBASIC14.02□□□□□ -0.17
HLA-DOBP13765 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.02□□□□□ -0.17
HLA-DOBP13765 AL390754.1-201ENST00000619088 582 ntBASIC14.02□□□□□ -0.17
HLA-DOBP13765 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DOBP13765 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.02□□□□□ -0.17
HLA-DOBP13765 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HLA-DOBP13765 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 AC055876.3-201ENST00000431496 288 ntBASIC14.01□□□□□ -0.17
HLA-DOBP13765 AC241585.1-201ENST00000433527 519 ntBASIC14.01□□□□□ -0.17
HLA-DOBP13765 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 AC138649.4-201ENST00000612222 287 ntBASIC14.01□□□□□ -0.17
HLA-DOBP13765 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms